Andrew O. Finley
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Type
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Date
2021
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Working across space and time: nonstationarity in ecological research and application
Ecological research increasingly considers integrative relationships among phenomena at broad spatial and temporal domains. However, …
Christine R Rollinson
,
Andrew O Finley
,
M Ross Alexander
,
Sudipto Banerjee
,
Kelly-Ann {Dixon Hamil}
,
Lauren E Koenig
,
Dexter Henry Locke
,
Megan Peterson
,
Morgan W Tingley
,
Kathryn Wheeler
,
Casey Youngflesh
,
Elise F Zipkin
Trends in bird abundance differ among protected forests but not bird guilds
Jeffrey W. Doser
,
Aaron S. Weed
,
Elise F. Zipkin
,
Kathryn M. Miller
,
Andrew O. Finley
Over half of western United States' most abundant tree species in decline
Changing forest disturbance regimes and climate are driving accelerated tree mortality across temperate forests. However, it remains …
Hunter Stanke
,
Andrew O. Finley
,
Grant M. Domke
,
Aaron S. Weed
,
David W. MacFarlane
Integrating automated acoustic vocalization data and point count surveys for efficient estimation of bird abundance
Jeffrey W. Doser
,
Andrew O. Finley
,
Aaron S. Weed
,
Elise F. Zipkin
Addressing data integration challenges to link ecological processes across scales
Data integration is a statistical modeling approach that incorporates multiple data sources within a unified analytical framework. …
Elise F Zipkin
,
Erin R Zylstra
,
Alexander D Wright
,
Sarah P Saunders
,
Andrew O Finley
,
Michael C Dietze
,
Malcolm S Itter
,
Morgan W Tingley
rFIA: An R package for estimation of forest attributes with the US Forest Inventory and Analysis database
Hunter Stanke
,
Andrew O. Finley
,
Aaron S. Weed
,
Brian F. Walters
,
Grant M. Domke
R package for Nearest Neighbor Gaussian Process models
This paper describes and illustrates functionality of the spNNGP R package. The package provides a suite of spatial regression models …
Andrew O Finley
,
Abhirup Datta
,
Sudipto Banerjee
Introduction to Bayesian Methods in Ecology and Natural Resources
Edwin J. Green
,
Andrew O. Finley
,
William E. Strawderman
Highly Scalable Bayesian Geostatistical Modeling via Meshed Gaussian Processes on Partitioned Domains
Michele Peruzzi
,
Sudipto Banerjee
,
Andrew O. Finley
High-dimensional multivariate Geostatistics: A Bayesian Matrix-Normal Approach
Lu Zhang
,
Sudipto Banerjee
,
Andrew O. Finley
ForestFit: An R package for modeling plant size distributions
Mahdi Teimouri
,
Jeffrey W. Doser
,
Andrew O. Finley
Characterizing functional relationships between anthropogenic and biological sounds: a western New York state soundscape case study
Jeffrey W. Doser
,
Kristina M. Hannam
,
Andrew O. Finley
Beyond counts and averages: Relating geodiversity to dimensions of biodiversity
Abstract Aim We may be able to buffer biodiversity against the effects of ongoing climate change by prioritizing the protection of …
Quentin D. Read
,
Phoebe L. Zarnetske
,
Sydne Record
,
Kyla M. Dahlin
,
Jennifer K. Costanza
,
Andrew O. Finley
,
Keith D. Gaddis
,
John M. Grady
,
Martina L. Hobi
,
Andrew M. Latimer
,
Sparkle L. Malone
,
Scott V. Ollinger
,
Stephanie Pau
,
Adam M. Wilson
Bayesian spatially varying coefficient models in the spBayes R package
This paper describes and illustrates new functionality for fitting spatially varying coefficients models in the spBayes (version 0.4–2) …
Andrew O. Finley
,
Sudipto Banerjee
Assessing soundscape disturbance through hierarchical models and acoustic indices: A case study on a shelterwood logged northern Michigan forest
Jeffrey W.Doser
,
Andrew O.Finley
,
Eric P.Kasten
,
Stuart H.Gage
Towards connecting biodiversity and geodiversity across scales with satellite remote sensing
Phoebe L Zarnetske
,
Quentin D Read
,
Sydne Record
,
Keith D Gaddis
,
Stephanie Pau
,
Martina L Hobi
,
Sparkle L Malone
,
Jennifer Costanza
,
Kyla M Dahlin
,
Andrew M Latimer
,
{others}
Spatial Factor Models for High-Dimensional and Large Spatial Data: An Application in Forest Variable Mapping
D. Taylor-Rodriguez
,
Andrew O. Finley
,
A. Datta
,
C. Babcock
,
H. Andersen
,
B. Cook
,
D. Morton
,
S. Banerjee
rFIA: An R package for space-time estimation of forest attributes with the Forest Inventory and Analysis Database
Hunter Stanke
,
Andrew O. Finley
,
Aaron S. Weed
,
Brian F. Walters
,
Grant M. Domke
ForestFit: An R package for modeling tree diameter distributions
Mahdi Teimouri
,
Jeffrey W. Doser
,
Andrew O. Finley
Efficient algorithms for Bayesian nearest neighbor Gaussian processes
Andrew O Finley
,
Abhirup Datta
,
Bruce D Cook
,
Douglas C Morton
,
Hans E Andersen
,
Sudipto Banerjee
EcoMem: An R package for quantifying ecological memory
Malcolm S Itter
,
Jarno Vanhatalo
,
Andrew O Finley
Conjugate Nearest Neighbor Gaussian Process Models for Efficient Statistical Interpolation of Large Spatial Data
Shinichiro Shirota
,
Andrew O Finley
,
Bruce D Cook
,
Sudipto Banerjee
Characterizing functional relationships between technophony and biophony: A western New York soundscape case study
Jeffrey W Doser
,
Kristina M Hannam
,
Andrew O Finley
Boreal tree growth exhibits decadal-scale ecological memory to drought and insect defoliation, but no negative response to their interaction
Malcolm S Itter
,
LoiNANAc D’Orangeville
,
Andria Dawson
,
Daniel Kneeshaw
,
Louis Duchesne
,
Andrew O Finle
Assessing soundscape disturbance through hierarchical models and acoustic indices: a case study on a shelterwood logged northern Michigan forest
Jeffrey W. Doser
,
Andrew O. Finley
,
Eric P. Kasten
,
Stuart H. Gage
A case study competition among methods for analyzing large spatial data
Matthew J Heaton
,
Abhirup Datta
,
Andrew O Finley
,
Reinhard Furrer
,
Joseph Guinness
,
Rajarshi Guhaniyogi
,
Florian Gerber
,
Robert B Gramacy
,
Dorit Hammerling
,
Matthias Katzfuss
,
{others}
A Case Study Competition Among Methods for Analyzing Large Spatial Data
The Gaussian process is an indispensable tool for spatial data analysts. The onset of the ``big data” era, however, has lead to …
Matthew J. Heaton
,
Abhirup Datta
,
Andrew O. Finley
,
Reinhard Furrer
,
Joseph Guinness
,
Rajarshi Guhaniyogi
,
Florian Gerber
,
Robert B. Gramacy
,
Dorit Hammerling
,
Matthias Katzfuss
,
Finn Lindgren
,
Douglas W. Nychka
,
Furong Sun
,
Andrew Zammit-Mangion
Spatial Factor Models for High-Dimensional and Large Spatial Data: An Application in Forest Variable Mapping
Daniel Taylor-Rodriguez
,
Andrew O Finley
,
Abhirup Datta
,
Chad Babcock
,
Hans-Erik Andersen
,
Bruce D Cook
,
Douglas C Morton
,
Sudipto Banerjee
Remote sensing to reduce the effects of spatial autocorrelation on design-based inference for forest inventory using systematic samples
Chad Babcock
,
Andrew O Finley
,
Timothy G Gregoire
,
Hans-Erik Andersen
Regional-based mitigation to reduce wildlife--vehicle collisions
Nathan P Snow
,
Zhen Zhang
,
Andrew O Finley
,
Brent A Rudolph
,
William F Porter
,
David M Williams
,
Scott R Winterstein
Hierarchical Bayesian models for small area estimation of forest variables using LiDAR
Light detection and ranging (LiDAR) data have become almost ubiquitous as a remote sensing tool in forestry estimation and mapping …
Neil R. Ver Planck
,
Andrew O. Finley
,
John A. Kershaw
,
Aaron R. Weiskittel
,
Megan C. Kress
Geostatistical estimation of forest biomass in interior Alaska combining Landsat-derived tree cover, sampled airborne lidar and field observations
Chad Babcock
,
Andrew O Finley
,
Hans-Erik Andersen
,
Robert Pattison
,
Bruce D Cook
,
Douglas C Morton
,
Michael Alonzo
,
Ross Nelson
,
Timothy Gregoire
,
Liviu Ene
,
{others}
Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings
Andrew O Finley
,
Patrick S Forsythe
,
James A Crossman
,
Edward A Baker
,
Kim T Scribner
Variable effects of climate on forest growth in relation to climate extremes, disturbance, and forest dynamics
Malcolm S Itter
,
Andrew O Finley
,
Anthony W D’Amato
,
Jane R Foster
,
John B Bradford
Joint hierarchical models for sparsely sampled high-dimensional LiDAR and forest variables
Andrew O Finley
,
Sudipto Banerjee
,
Yuzhen Zhou
,
Bruce D Cook
,
Chad Babcock
Hierarchical Bayesian models for small area estimation of county-level private forest landowner population
Neil R {Ver Planck}
,
Andrew O Finley
,
Emily S Huff
Approaches for advancing scientific understanding of macrosystems
Ofir Levy
,
Becky A Ball
,
Ben Bond-Lamberty
,
Kendra S Cheruvelil
,
Andrew O Finley
,
Noah R Lottig
,
Surangi W Punyasena
,
Jingfeng Xiao
,
Jizhong Zhou
,
Lauren B Buckley
,
{others}
A model-based approach to wildland fire reconstruction using sediment charcoal records
Malcolm S Itter
,
Andrew O Finley
,
Mevin B Hooten
,
Philip E Higuera
,
Jennifer R Marlon
,
Ryan Kelly
,
Jason S McLachlan
Synergistic effects of climate and land cover: grassland birds are more vulnerable to climate change
Marta A Jarzyna
,
Benjamin Zuckerberg
,
Andrew O Finley
,
William F Porter
Spatial variation in nutrient and water color effects on lake chlorophyll at macroscales
C Emi Fergus
,
Andrew O Finley
,
Patricia A Soranno
,
Tyler Wagner
Seedling survival responses to conspecific density, soil nutrients, and irradiance vary with age in a tropical forest
Sydne Record
,
Richard K Kobe
,
Corine F Vriesendorp
,
Andrew O Finley
Predicting tree biomass growth in the temperate--boreal ecotone: Is tree size, age, competition, or climate response most important?
Jane R Foster
,
Andrew O Finley
,
Anthony W D’Amato
,
John B Bradford
,
Sudipto Banerjee
On nearest-neighbor Gaussian process models for massive spatial data
Abhirup Datta
,
Sudipto Banerjee
,
Andrew O Finley
,
Alan E Gelfand
Observation-based blended projections from ensembles of regional climate models
Esther Salazar
,
Dorit Hammerling
,
Xia Wang
,
Bruno San o
,
Andrew O Finley
,
Linda O Mearns
Nonseparable dynamic nearest neighbor Gaussian process models for large spatio-temporal data with an application to particulate matter analysis
Abhirup Datta
,
Sudipto Banerjee
,
Andrew O Finley
,
Nicholas AS Hamm
,
Martijn Schaap
Modeling forest biomass and growth: Coupling long-term inventory and LiDAR data
Chad Babcock
,
Andrew O Finley
,
Bruce D Cook
,
Aaron Weiskittel
,
Christopher W Woodall
Hierarchical nearest-neighbor Gaussian process models for large geostatistical datasets
Abhirup Datta
,
Sudipto Banerjee
,
Andrew O Finley
,
Alan E Gelfand
Evaluation of the USDA Forest Service National Woodland Owner Survey estimators for private forest area and landowners: a case study of Montana
Neil R {Ver Planck}
,
Alexander L Metcalf
,
Andrew O Finley
,
James C Finley
spBayes for Large Univariate and Multivariate Point-Referenced Spatio-Temporal Data Models
In this paper we detail the reformulation and rewrite of core functions in the spBayes R package. These efforts have focused on …
Andrew Finley
,
Sudipto Banerjee
,
Alan Gelfand
Spatial scaling of temporal changes in avian communities
Marta A Jarzyna
,
Benjamin Zuckerberg
,
William F Porter
,
Andrew O Finley
,
Brian A Maurer
Spatial analysis of anthropogenic landscape disturbance and Buruli ulcer disease in Benin
Lindsay P Campbell
,
Andrew O Finley
,
M Eric Benbow
,
Jenni Gronseth
,
Pamela Small
,
Roch Christian Johnson
,
Ghislain E Sopoh
,
Richard M Merritt
,
Heather Williamson
,
Jiaguo Qi
Linear models for airborne-laser-scanning-based operational forest inventory with small field sample size and highly correlated LiDAR data
Virpi Junttila
,
Tuomo Kauranne
,
Andrew O Finley
,
John B Bradford
LiDAR based prediction of forest biomass using hierarchical models with spatially varying coefficients
Chad Babcock
,
Andrew O Finley
,
John B Bradford
,
Randall Kolka
,
Richard Birdsey
,
Michael G Ryan
Landscape fragmentation affects responses of avian communities to climate change
Marta A Jarzyna
,
William F Porter
,
Brian A Maurer
,
Benjamin Zuckerberg
,
Andrew O Finley
Distribution of near-surface permafrost in Alaska: Estimates of present and future conditions
Neal J Pastick
,
M Torre Jorgenson
,
Bruce K Wylie
,
Shawn J Nield
,
Kristofer D Johnson
,
Andrew O Finley
A spatially varying coefficient model for mapping PM10 air quality at the European scale
NAS Hamm
,
AO Finley
,
M Schaap
,
A Stein
Integrating forest inventory and analysis data into a LIDAR-based carbon monitoring system
Kristofer D Johnson
,
Richard Birdsey
,
Andrew O Finley
,
Anu Swantaran
,
Ralph Dubayah
,
Craig Wayson
,
Rachel Riemann
Editors are editors, not oracles
Dave Schimel
,
Donald R Strong
,
Aaron M Ellison
,
Debra PC Peters
,
Sue Silver
,
Edward A Johnson
,
Jayne Belnap
,
Aimee T Classen
,
Timothy E Essington
,
Andrew O Finley
,
{others}
Dynamic spatial regression models for space-varying forest stand tables
Andrew O Finley
,
Sudipto Banerjee
,
Aaron R Weiskittel
,
Chad Babcock
,
Bruce D Cook
Bayesian hierarchical models for spatially misaligned data in R
Andrew O Finley
,
Sudipto Banerjee
,
Bruce D Cook
Approaches to advance scientific understanding of macrosystems ecology
Ofir Levy
,
Becky A Ball
,
Ben Bond-Lamberty
,
Kendra S Cheruvelil
,
Andrew O Finley
,
Noah R Lottig
,
Surangi W Punyasena
,
Jingfeng Xiao
,
Jizhong Zhou
,
Lauren B Buckley
,
{others}
Accounting for the space-varying nature of the relationships between temporal community turnover and the environment
Marta A Jarzyna
,
Andrew O Finley
,
William F Porter
,
Brian A Maurer
,
Colin M Beier
,
Benjamin Zuckerberg
Strategies for minimizing sample size for use in airborne LiDAR-based forest inventory
Virpi Junttila
,
Andrew O Finley
,
John B Bradford
,
Tuomo Kauranne
Spatial regression methods capture prediction uncertainty in species distribution model projections through time
Alan K Swanson
,
Solomon Z Dobrowski
,
Andrew O Finley
,
James H Thorne
,
Michael K Schwartz
Should species distribution models account for spatial autocorrelation? A test of model projections across eight millennia of climate change
Sydne Record
,
Matthew C Fitzpatrick
,
Andrew O Finley
,
Sam Veloz
,
Aaron M Ellison
Permafrost and organic layer interactions over a climate gradient in a discontinuous permafrost zone
Kristofer D Johnson
,
Jennifer W Harden
,
A David McGuire
,
Mark Clark
,
Fengming Yuan
,
Andrew O Finley
Modeling complex spatial dependencies: Low-rank spatially varying cross-covariances with application to soil nutrient data
Rajarshi Guhaniyogi
,
Andrew O Finley
,
Sudipto Banerjee
,
Richard K Kobe
Hierarchical Bayesian spatial models for predicting multiple forest variables using waveform LiDAR, hyperspectral imagery, and large inventory datasets
Andrew O Finley
,
Sudipto Banerjee
,
Bruce D Cook
,
John B Bradford
Tropical tree growth is correlated with soil phosphorus, potassium, and calcium, though not for legumes
Thomas W Baribault
,
Richard K Kobe
,
Andrew O Finley
Spatial design for knot selection in knot-based dimension reduction models
Alan E Gelfand
,
Sudipto Banerjee
,
Andrew O Finley
Multivariate spatial regression models for predicting individual tree structure variables using LiDAR data
Chad Babcock
,
Jason Matney
,
Andrew O Finley
,
Aaron Weiskittel
,
Bruce D Cook
Bayesian dynamic modeling for large space-time datasets using Gaussian predictive processes
Andrew O Finley
,
Sudipto Banerjee
,
Alan E Gelfand
Approximate Bayesian inference for large spatial datasets using predictive process models
Jo Eidsvik
,
Andrew O Finley
,
Sudipto Banerjee
,
Havard Rue
An analysis of asthma hospitalizations, air pollution, and weather conditions in Los Angeles County, California
Paul L Delamater
,
Andrew O Finley
,
Sudipto Banerjee
Variational Bayesian methods for spatial data analysis
Qian Ren
,
Sudipto Banerjee
,
Andrew O Finley
,
James S Hodges
Improving crop model inference through Bayesian melding with spatially varying parameters
Andrew O Finley
,
Sudipto Banerjee
,
Bruno Basso
Effects of stand and inter-specific stocking on maximizing standing tree carbon stocks in the eastern United States
Christopher W Woodall
,
Anthony W D’Amato
,
John B Bradford
,
Andrew O Finley
Comparing spatially-varying coefficients models for analysis of ecological data with non-stationary and anisotropic residual dependence
Andrew O Finley
Comparing and blending regional climate model predictions for the American southwest
Esther Salazar
,
Bruno San o
,
Andrew O Finley
,
Dorit Hammerling
,
Ingelin Steinsland
,
Xia Wang
,
Paul Delamater
Adaptive Gaussian predictive process models for large spatial datasets
Rajarshi Guhaniyogi
,
Andrew O Finley
,
Sudipto Banerjee
,
Alan E Gelfand
A hierarchical model for quantifying forest variables over large heterogeneous landscapes with uncertain forest areas
Andrew O Finley
,
Sudipto Banerjee
,
David W MacFarlane
Spatial modelling of car ownership data: a case study from the United Kingdom
Stephen Clark
,
Andrew O Finley
Selecting tree species for testing climate change migration hypotheses using forest inventory data
CW Woodall
,
CM Oswalt
,
JA Westfall
,
CH Perry
,
MD Nelson
,
AO Finley
Nonlinear hierarchical models for predicting cover crop biomass using Normalized Difference Vegetation Index
Juan David Munoz
,
Andrew O Finley
,
Ron Gehl
,
Sasha Kravchenko
Hierarchical spatial process models for multiple traits in large genetic trials
Sudipto Banerjee
,
Andrew O Finley
,
Patrik Waldmann
,
Tore Ericsson
Improving the performance of predictive process modeling for large datasets
Andrew O Finley
,
Huiyan Sang
,
Sudipto Banerjee
,
Alan E Gelfand
Hierarchical spatial models for predicting tree species assemblages across large domains
Andrew O. Finley
,
Sudipto Banerjee
,
Ronald E. McRoberts
Hierarchical spatial modeling of additive and dominance genetic variance for large spatial trial datasets
Andrew O Finley
,
Sudipto Banerjee
,
Patrik Waldmann
,
Tore Ericsson
An indicator of tree migration in forests of the eastern United States
CW Woodall
,
CM Oswalt
,
JA Westfall
,
CH Perry
,
MD Nelson
,
AO Finley
yaImpute: an R package for kNN imputation
Nicholas L Crookston
,
Andrew O Finley
Hierarchical multiresolution approaches for dense point-level breast cancer treatment data
Shengde Liang
,
Sudipto Banerjee
,
Sally Bushhouse
,
Andrew O Finley
,
Bradley P Carlin
Gaussian predictive process models for large spatial data sets
Sudipto Banerjee
,
Alan E Gelfand
,
Andrew O Finley
,
Huiyan Sang
Efficient k-nearest neighbor searches for multi-source forest attribute mapping
Andrew O Finley
,
Ronald E McRoberts
A Bayesian approach to multi-source forest area estimation
Andrew O Finley
,
Sudipto Banerjee
,
Ronald E McRoberts
spBayes: an R package for univariate and multivariate hierarchical point-referenced spatial models
Andrew O Finley
,
Sudipto Banerjee
,
Bradley P Carlin
Estimating areal means and variances of forest attributes using the k-Nearest Neighbors technique and satellite imagery
Ronald E McRoberts
,
Erkki O Tomppo
,
Andrew O Finley
,
Juha Heikkinen
Bayesian multi-resolution modeling for spatially replicated data sets with application to forest biomass data
Sudipto Banerjee
,
Andrew Finley
Thoreau, Muir, and Jane Doe: different types of private forest owners need different kinds of forest management
Andrew O Finley
,
David B {Kittredge Jr}
Stationary process approximation for the analysis of large spatial datasets
Gangqiang Xia
,
Alan E Gelfand
Applying an efficient k-nearest neighbor search to forest attribute imputation
Andrew O Finley
,
Ronald E McRoberts
,
Alan R Ek
Delineation of forest/nonforest land use classes using nearest neighbor methods
Reija Haapanen
,
Alan R Ek
,
Marvin E Bauer
,
Andrew O Finley
Timber harvesting as ongoing disturbance in a landscape of diverse ownership
David B {Kittredge Jr}
,
Andrew O Finley
,
David R Foster
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